Remarks acm_xplor_top.txt Remarks Created by XPLO2D V. 050802/3.3.2 at Thu Feb 28 16:17:10 2008 for A. Nonymous Remarks Auto-generated by XPLO2D from file acm_msd.pdb Remarks You *MUST* check/edit MASSes and CHARges !!! Remarks Check DONOrs and ACCEptors Remarks Verify IMPRopers yourself Remarks DIHEdrals which are not flat are commented out set echo=false end { Note: edit masses if necessary } MASS C_1 12.01100 ! assuming C -> 12.01100 + 1.008 * 0 (Hs) MASS O_2 15.99900 ! assuming O -> 15.99900 + 1.008 * 0 (Hs) MASS N_3 14.00700 ! assuming N -> 14.00700 + 1.008 * 0 (Hs) MASS C_4 15.03500 ! assuming C -> 12.01100 + 1.008 * 3 (Hs) autogenerate angles=true end RESIdue ACM { Note: electrostatics should normally not be used in } { crystallographic refinement since it can produce } { artefacts. For this reason, all charges are set to } { zero by default. Edit them if necessary } GROUp ATOM C1 TYPE C_1 CHARge 0.0 END ! Nr of Hs = 0 ATOM O TYPE O_2 CHARge 0.0 END ! Nr of Hs = 0 ATOM N TYPE N_3 CHARge 0.0 END ! Nr of Hs = 0 ATOM C2 TYPE C_4 CHARge 0.0 END ! Nr of Hs = 3 BOND C1 O BOND C1 N BOND C1 C2 { Note: edit these DIHEdrals if necessary } { Note: edit these IMPRopers if necessary } IMPRoper C1 O N C2 ! chirality or flatness improper 0.00 { Note: edit any DONOrs and ACCEptors if necessary } ACCEptor O C1 END { RESIdue ACM }